C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030118 Dnaja1-001 ENSMUSG00000028410 10090 + 4:40722480-40734964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030118
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030118 7.335±1.60 3.224±0.54 10.186±3.79 24.766±12.63 4.206±0.69 2.867±0.67 2.904±0.15 11.015±2.85 9.053±2.19 5.854±1.67 4.309±1.04 12.339±7.03 30.449±14.62 9.989±3.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061D CIL_00061D_0002 CGP 4:40682382-40737149
CIL_0005V0 CIL_0005V0_0003 CGP 4:40722150-40757923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0007283 IMP spermatogenesis
GO:0009408 IEA response to heat
GO:0030317 IMP sperm motility
GO:0030521 IMP androgen receptor signaling pathway
GO:0030544 ISS Hsp70 protein binding
GO:0031072 IEA heat shock protein binding
GO:0043065 ISS positive regulation of apoptotic process
GO:0043066 ISS negative regulation of apoptotic process
GO:0043508 ISS negative regulation of JUN kinase activity
GO:0046872 IEA metal ion binding
GO:0050750 ISO low-density lipoprotein particle receptor binding
GO:0051082 IEA unfolded protein binding
GO:0051087 ISS chaperone binding
GO:0051223 ISS regulation of protein transport
GO:0070585 ISS protein localization to mitochondrion
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330899 DNAJA1-001 protein_coding Homo_sapiens 0 2146
ENST00000399417 DNAJA1P3-001 processed_pseudogene Homo_sapiens 0 1450
ENST00000425106 DNAJA1P1-001 processed_pseudogene Homo_sapiens 0 869
ENST00000440278 DNAJA1P5-001 processed_pseudogene Homo_sapiens 0 736
ENST00000465677 DNAJA1-002 processed_transcript Homo_sapiens 0 418
ENST00000495015 DNAJA1-003 processed_transcript Homo_sapiens 0 370

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