C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330899 DNAJA1-001 ENSG00000086061 9606 + 9:33025211-33039907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330899 22.854±0.00 21.428±0.00 3.223±0.00 33.507±17.79 19.135±6.27 33.588±27.72 9.697±6.69 34.212±21.48 15.952±6.25 39.400±27.73 6.169±4.21 51.907±26.89 68.651±19.57 118.371±38.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061D CIL_00061D_0001 CGP 9:32972606-33039907
CIL_0005V0 CIL_0005V0_0002 CGP 9:33025211-33076659

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0001664 IPI G-protein coupled receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005829 IDA cytosol
GO:0006457 IEA protein folding
GO:0006986 TAS response to unfolded protein
GO:0007283 IEA spermatogenesis
GO:0009408 IEA response to heat
GO:0016020 IDA membrane
GO:0030317 IEA sperm motility
GO:0030521 IEA androgen receptor signaling pathway
GO:0030544 IDA Hsp70 protein binding
GO:0031072 IEA heat shock protein binding
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0031625 IPI ubiquitin protein ligase binding
GO:0042769 IEA DNA damage response, detection of DNA damage
GO:0043065 IMP positive regulation of apoptotic process
GO:0043066 IMP negative regulation of apoptotic process
GO:0043508 IMP negative regulation of JUN kinase activity
GO:0046872 IEA metal ion binding
GO:0050750 IDA low-density lipoprotein particle receptor binding
GO:0051082 IEA unfolded protein binding
GO:0051087 IDA chaperone binding
GO:0051223 IDA regulation of protein transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070585 IMP protein localization to mitochondrion
GO:0098554 TAS cytoplasmic side of endoplasmic reticulum membrane
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030118 Dnaja1-001 protein_coding Mus_musculus 0 2146
ENSMUST00000164233 Dnaja1-201 protein_coding Mus_musculus 0 2049
ENSMUST00000119884 Gm7816-001 processed_pseudogene Mus_musculus 0 1668
ENSMUST00000121585 Gm15542-001 processed_pseudogene Mus_musculus 0 1657
ENSMUST00000118081 Gm6335-001 processed_pseudogene Mus_musculus 0 1557
ENSMUST00000129204 Dnaja1-002 processed_transcript Mus_musculus 0 1467
ENSMUST00000137246 Dnaja1-004 protein_coding Mus_musculus 0 1179
ENSMUST00000148976 Dnaja1-008 processed_transcript Mus_musculus 0 985
ENSMUST00000125442 Dnaja1-009 protein_coding Mus_musculus 0 852
ENSMUST00000162103 Dnaja1-ps-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000149794 Dnaja1-006 protein_coding Mus_musculus 0 534
ENSMUST00000137476 Dnaja1-007 processed_transcript Mus_musculus 0 508

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