C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006AW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000086065-ENSG00000086102 CGP 9606 9:33264879-33371157
GeneTranscriptPositionBiotype
ENSG00000086065 (CHMP5)
charged multivesicular body protein 5
ENST00000223500 (CHMP5-001) 33264942-33281539 protein_coding
ENST00000419016 (CHMP5-201) 33264879-33282069 protein_coding
ENST00000487080 (CHMP5-002) 33277793-33280951 processed_transcript
ENSG00000086102 (NFX1)
nuclear transcription factor, X-box binding 1
ENST00000318524 (NFX1-004) 33290545-33348723 protein_coding
ENST00000379521 (NFX1-002) 33290512-33365283 protein_coding
ENST00000379540 (NFX1-001) 33290511-33371157 protein_coding
ENST00000463421 (NFX1-003) 33365233-33367578 processed_transcript
ENST00000466359 (NFX1-005) 33319021-33332657 processed_transcript
ENST00000466971 (NFX1-006) 33342812-33351882 processed_transcript
CIL_0006AW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028419-ENSMUSG00000028423 CGP 10090 4:40948407-41025993
GeneTranscriptPositionBiotype
ENSMUSG00000028419 (Chmp5)
charged multivesicular body protein 5
ENSMUST00000030128 (Chmp5-001) 40948407-40965303 protein_coding
ENSMUSG00000028423 (Nfx1)
nuclear transcription factor, X-box binding 1
ENSMUST00000030133 (Nfx1-002) 40970906-41013871 protein_coding
ENSMUST00000091614 (Nfx1-007) 40970906-41012608 protein_coding
ENSMUST00000098143 (Nfx1-001) 40970906-41025993 protein_coding
ENSMUST00000124595 (Nfx1-005) 41009207-41022321 processed_transcript
ENSMUST00000131305 (Nfx1-006) 41023204-41024540 processed_transcript
ENSMUST00000136717 (Nfx1-003) 41021366-41025178 processed_transcript
ENSMUST00000143798 (Nfx1-004) 41002510-41012169 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AW_0001ENSG00000086065ENST00000223500ENST00000419016ENST00000487080ENSG00000086102ENST00000318524ENST00000379521ENST00000379540ENST00000463421ENST00000466359ENST00000466971CIL_0006AW_0002ENSMUSG00000028419ENSMUST00000030128ENSMUSG00000028423ENSMUST00000030133ENSMUST00000091614ENSMUST00000098143ENSMUST00000124595ENSMUST00000131305ENSMUST00000136717ENSMUST00000143798
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AW_0001ENSG00000086065ENST00000223500ENSG00000086102ENST00000318524ENST00000379521ENST00000379540CIL_0006AW_0002ENSMUSG00000028419ENSMUST00000030128ENSMUSG00000028423ENSMUST00000030133ENSMUST00000091614ENSMUST00000098143ENSMUST00000124595ENSMUST00000143798
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086065 ENST00000223500 20.882±0.00 20.697±0.00 6.703±0.00 31.286±2.70 18.093±5.85 18.641±14.65 10.181±4.53 21.898±10.75 10.160±1.34 26.210±11.57 6.892±3.11 20.558±6.97 26.906±2.94 26.097±7.57
ENST00000419016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000086102 ENST00000318524 4.584±0.00 8.708±0.00 0.859±0.00 4.307±2.36 3.586±1.10 5.445±0.00 4.453±2.89 5.275±0.00 3.497±0.61 3.231±2.32 8.089±7.60 5.440±2.51 4.168±0.18 4.212±0.07
ENST00000379521 N/A N/A N/A N/A N/A 1.081±0.00 N/A 1.427±0.00 N/A N/A N/A N/A N/A N/A
ENST00000379540 3.210±0.00 2.333±0.00 0.931±0.00 2.454±0.92 2.689±0.76 1.576±0.26 1.160±0.62 1.275±0.10 2.246±0.00 1.883±0.35 3.831±0.00 4.892±2.33 2.305±0.91 5.096±1.90
ENST00000463421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028419 ENSMUST00000030128 16.546±2.38 7.449±0.74 50.832±7.25 41.858±5.12 9.269±3.52 15.935±2.13 9.101±0.38 25.816±4.41 18.077±6.54 13.444±5.60 11.481±0.77 14.207±14.39 38.644±12.18 15.286±2.05
ENSMUSG00000028423 ENSMUST00000030133 N/A N/A 3.271±0.13 6.311±1.49 N/A N/A 1.335±0.26 2.201±0.60 2.322±0.92 N/A 1.954±0.20 N/A 4.226±0.96 1.479±0.19
ENSMUST00000091614 5.681±0.02 N/A 5.228±0.23 9.281±4.45 N/A 3.865±0.63 1.484±0.24 2.057±0.16 5.277±2.84 3.068±0.46 1.995±0.36 11.870±4.67 15.876±4.79 3.215±0.54
ENSMUST00000098143 10.406±2.08 8.233±1.35 10.373±1.01 9.206±3.55 10.667±2.58 8.554±1.76 3.504±0.94 6.013±1.32 6.449±2.61 7.547±0.68 3.437±0.53 15.284±4.34 12.398±5.15 5.020±2.27
ENSMUST00000124595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.059±0.00
ENSMUST00000131305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143798 N/A 13.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading