C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030471 Lrrc41-001 ENSMUSG00000028703 10090 + 4:116075269-116097043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030471
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030471 3.183±0.09 5.245±3.39 6.708±5.58 2.212±0.00 3.144±1.87 3.452±0.41 5.568±3.19 2.508±0.25 3.125±0.60 10.888±5.65 7.555±3.72 10.151±2.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343304 LRRC41-201 protein_coding Homo_sapiens 0 3594
ENST00000371975 RAD54L-001 protein_coding Homo_sapiens 3e-17 95
ENST00000442598 RAD54L-201 protein_coding Homo_sapiens 3e-17 95
ENST00000469150 LRRC41-004 processed_transcript Homo_sapiens 0 259
ENST00000472710 LRRC41-002 nonsense_mediated_decay Homo_sapiens 0 2433
ENST00000488942 RAD54L-011 protein_coding Homo_sapiens 0.00000000002 75
ENST00000496156 LRRC41-005 protein_coding Homo_sapiens 0 647
ENST00000498402 LRRC41-003 nonsense_mediated_decay Homo_sapiens 0 1847
ENST00000615587 LRRC41-006 protein_coding Homo_sapiens 0 3428
ENST00000617190 LRRC41-001 protein_coding Homo_sapiens 0 3664
ENST00000617760 LRRC41-202 protein_coding Homo_sapiens 0 2372

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