C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EBNA1 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030501 Ebna1bp2-001 ENSMUSG00000028729 10090 + 4:118620799-118627776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030501 3.274±1.40 3.594±0.34 11.986±1.95 13.783±4.06 2.772±0.76 2.487±0.60 2.644±0.34 3.149±0.20 4.957±3.48 4.402±0.41 6.842±0.68 5.133±2.65 7.105±3.11 3.924±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 TAS nucleolus
GO:0006364 TAS rRNA processing
GO:0007059 TAS chromosome segregation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236051 EBNA1BP2-001 protein_coding Homo_sapiens 0 920
ENST00000355086 SRGAP1-001 protein_coding Homo_sapiens 0.00000005 68
ENST00000372146 GTF3C4-001 protein_coding Homo_sapiens 0.000000002 71
ENST00000431635 EBNA1BP2-201 protein_coding Homo_sapiens 0 920
ENST00000463906 EBNA1BP2-002 processed_transcript Homo_sapiens 0 625
ENST00000464363 NELFCD-006 retained_intron Homo_sapiens 0.0000000001 71
ENST00000465774 RBM20-008 retained_intron Homo_sapiens 0.000001 58

Loading