C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled coil domain containing 28B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030586 Ccdc28b-001 ENSMUSG00000028795 10090 - 4:129619274-129623947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSMUST00000030586
Transcript ID Brain Liver Muscle
ENSMUST00000030586 35.698±8.05 17.579±0.00 10.592±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0042384 IEA cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373602 CCDC28B-002 protein_coding Homo_sapiens 0 808
ENST00000421922 CCDC28B-001 protein_coding Homo_sapiens 0 732
ENST00000461819 CCDC28B-005 nonsense_mediated_decay Homo_sapiens 0 272

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