C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439252 AC012066.1-001 ENSG00000213197 9606 + 2:152389937-152390630 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439252
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439252 0.024±0.00 0.132±0.00 1.185±0.00 0.988±0.18 1.232±0.98 0.326±0.28 0.168±0.14 0.166±0.00 2.268±0.00 2.329±0.00 0.357±0.31 1.154±1.45 0.047±0.00 0.106±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E6 CIL_0007E6_0001 CGP 2:152116801-152649834
CIL_0007E5 CIL_0007E5_0001 CGP 2:152335237-152717997

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030665 Nudc-001 protein_coding Mus_musculus 0 715
ENSMUST00000148612 Nudc-003 processed_transcript Mus_musculus 0 409
ENSMUST00000141860 Nudc-002 processed_transcript Mus_musculus 0 200

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