C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030878 Slc26a5-001 ENSMUSG00000029015 10090 - 5:21810655-21865604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungPlacentaTestisENSMUST00000030878
Transcript ID Brain Liver Lung Placenta Testis
ENSMUST00000030878 0.031±0.00 0.009±0.00 0.021±0.00 0.264±0.03 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RC CIL_0001RC_0003 CGP 5:21785283-21865604
CIL_0005C9 CIL_0005C9_0002 CGP 5:21810655-22344702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007605 IEA sensory perception of sound
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008360 IEA regulation of cell shape
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0030507 IDA spectrin binding
GO:0042391 IDA regulation of membrane potential
GO:1902358 IEA sulfate transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306312 SLC26A5-001 protein_coding Homo_sapiens 0 2660
ENST00000339444 SLC26A5-002 protein_coding Homo_sapiens 0 2516
ENST00000354356 SLC26A5-201 protein_coding Homo_sapiens 0 2638
ENST00000356767 SLC26A5-003 protein_coding Homo_sapiens 0 1247
ENST00000393723 SLC26A5-010 protein_coding Homo_sapiens 0 1624
ENST00000393727 SLC26A5-009 protein_coding Homo_sapiens 0 2603
ENST00000393729 SLC26A5-013 protein_coding Homo_sapiens 0 2167
ENST00000393730 SLC26A5-008 protein_coding Homo_sapiens 0 1659
ENST00000393735 SLC26A5-004 protein_coding Homo_sapiens 0 1906
ENST00000423416 SLC26A5-011 nonsense_mediated_decay Homo_sapiens 0 1659
ENST00000432958 SLC26A5-202 protein_coding Homo_sapiens 0 1659
ENST00000445809 SLC26A5-005 nonsense_mediated_decay Homo_sapiens 0 928
ENST00000454864 SLC26A5-007 nonsense_mediated_decay Homo_sapiens 0 1559
ENST00000456463 SLC26A5-012 nonsense_mediated_decay Homo_sapiens 0 1637
ENST00000487407 SLC26A5-006 retained_intron Homo_sapiens 0 883

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