Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	low density lipoprotein receptor-related protein associated protein 1
ENSMUST00000030986	Lrpap1-001	ENSMUSG00000029103	10090	-	5:35091490-35105766	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000030986	34.302±7.34	21.753±3.26	17.813±0.26	20.507±12.60	16.376±1.46	15.848±2.23	8.785±0.55	76.023±3.42	10.556±2.82	25.653±1.85	9.304±0.63	32.079±3.53	50.320±32.01	12.618±1.68

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0001XD	CIL_0001XD_0002	CGP	5:35056813-35105766

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005515	IEA	protein binding
GO:0005576	IEA	extracellular region
GO:0005886	ISO	plasma membrane
GO:0008201	IEA	heparin binding
GO:0010916	IEA	negative regulation of very-low-density lipoprotein particle clearance
GO:0031982	IEA	vesicle
GO:0032091	IEA	negative regulation of protein binding
GO:0035473	IEA	lipase binding
GO:0048019	IEA	receptor antagonist activity
GO:0048237	IEA	rough endoplasmic reticulum lumen
GO:0050750	IPI	low-density lipoprotein particle receptor binding
GO:0070326	IEA	very-low-density lipoprotein particle receptor binding
GO:1900116	IEA	extracellular negative regulation of signal transduction
GO:1900222	IEA	negative regulation of beta-amyloid clearance

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000296325	LRPAP1-004	processed_transcript	Homo_sapiens	0	688
ENST00000500728	LRPAP1-001	protein_coding	Homo_sapiens	0	808
ENST00000509198	LRPAP1-002	retained_intron	Homo_sapiens	0	281
ENST00000515119	LRPAP1-003	nonsense_mediated_decay	Homo_sapiens	0	453

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