C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001XD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175920-ENSG00000163956 CGP 9606 4:3463311-3532559
GeneTranscriptPositionBiotype
ENSG00000163956 (LRPAP1)
low density lipoprotein receptor-related protein associated protein 1
ENST00000296325 (LRPAP1-004) 3512933-3532149 processed_transcript
ENST00000500728 (LRPAP1-001) 3506376-3532559 protein_coding
ENST00000509198 (LRPAP1-002) 3517661-3532422 retained_intron
ENST00000515119 (LRPAP1-003) 3515882-3532416 nonsense_mediated_decay
ENSG00000175920 (DOK7)
docking protein 7
ENST00000340083 (DOK7-002) 3463311-3494483 protein_coding
ENST00000503688 (DOK7-005) 3463311-3492888 processed_transcript
ENST00000507039 (DOK7-001) 3463311-3494483 protein_coding
ENST00000511267 (DOK7-006) 3463311-3476543 retained_intron
ENST00000512714 (DOK7-007) 3492795-3501473 processed_transcript
ENST00000513995 (DOK7-003) 3485349-3492885 retained_intron
ENST00000515886 (DOK7-004) 3484544-3494481 retained_intron
ENSG00000261643 (RP11-529E10.6)
ENST00000564650 (RP11-529E10.6-001) 3503597-3504457 sense_overlapping
CIL_0001XD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044716-ENSMUSG00000029103 CGP 10090 5:35056813-35105766
GeneTranscriptPositionBiotype
ENSMUSG00000029103 (Lrpap1)
low density lipoprotein receptor-related protein associated protein 1
ENSMUST00000030986 (Lrpap1-001) 35091490-35105766 protein_coding
ENSMUST00000132754 (Lrpap1-003) 35102509-35104540 protein_coding
ENSMUST00000135207 (Lrpap1-006) 35093295-35097722 retained_intron
ENSMUST00000147028 (Lrpap1-005) 35097598-35105689 retained_intron
ENSMUST00000152028 (Lrpap1-002) 35102128-35105696 retained_intron
ENSMUST00000153664 (Lrpap1-004) 35093069-35102514 protein_coding
ENSMUSG00000044716 (Dok7)
docking protein 7
ENSMUST00000050709 (Dok7-003) 35057077-35087839 protein_coding
ENSMUST00000101298 (Dok7-002) 35056813-35080964 protein_coding
ENSMUST00000114270 (Dok7-001) 35056862-35080964 protein_coding
ENSMUST00000133381 (Dok7-005) 35056888-35066485 protein_coding
ENSMUST00000155097 (Dok7-004) 35074958-35080964 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XD_0001ENSG00000163956ENST00000296325ENST00000500728ENST00000509198ENST00000515119ENSG00000175920ENST00000340083ENST00000503688ENST00000507039ENST00000511267ENST00000512714ENST00000513995ENST00000515886ENSG00000261643ENST00000564650CIL_0001XD_0002ENSMUSG00000029103ENSMUST00000030986ENSMUST00000132754ENSMUST00000135207ENSMUST00000147028ENSMUST00000152028ENSMUST00000153664ENSMUSG00000044716ENSMUST00000050709ENSMUST00000101298ENSMUST00000114270ENSMUST00000133381ENSMUST00000155097
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XD_0001ENSG00000163956ENST00000296325ENST00000500728ENST00000509198ENST00000515119ENSG00000175920ENST00000340083ENST00000503688ENST00000507039ENST00000511267ENST00000512714ENST00000513995ENST00000515886ENSG00000261643ENST00000564650CIL_0001XD_0002ENSMUSG00000029103ENSMUST00000030986ENSMUST00000135207ENSMUST00000147028ENSMUST00000152028ENSMUST00000153664ENSMUSG00000044716ENSMUST00000050709ENSMUST00000101298ENSMUST00000114270ENSMUST00000133381ENSMUST00000155097
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163956 ENST00000296325 39.064±0.00 53.767±0.00 13.675±0.00 44.647±24.39 35.899±23.41 31.664±24.15 37.527±29.94 46.820±23.83 26.172±18.43 40.043±29.98 23.555±17.47 43.655±37.49 104.346±52.74 88.588±26.27
ENST00000500728 2.387±0.00 3.205±0.00 0.939±0.00 3.705±0.97 2.026±1.09 1.660±0.88 3.577±0.00 2.913±1.52 1.428±0.63 1.839±0.71 1.692±0.80 3.035±1.59 17.160±4.12 7.300±3.68
ENST00000509198 N/A 13.832±0.00 N/A 6.496±0.00 3.545±0.00 15.087±0.00 13.626±7.45 N/A 9.152±0.00 14.556±0.00 3.839±0.00 13.177±7.29 71.674±24.37 72.963±0.00
ENST00000515119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.681±0.00 N/A N/A
ENSG00000175920 ENST00000340083 N/A N/A N/A N/A N/A N/A 1.799±0.85 N/A N/A N/A 1.923±0.00 0.727±0.23 N/A 1.847±0.16
ENST00000503688 N/A N/A N/A 0.656±0.00 0.860±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507039 N/A N/A 0.328±0.00 0.373±0.00 N/A N/A N/A 0.271±0.00 N/A 0.137±0.00 0.796±0.00 0.570±0.00 N/A 1.120±0.00
ENST00000511267 N/A N/A N/A 0.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512714 0.043±0.00 0.272±0.00 N/A 0.179±0.00 N/A 0.086±0.00 1.971±0.00 N/A N/A N/A N/A 0.102±0.00 0.083±0.00 0.958±0.00
ENST00000513995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.236±0.00 1.556±0.00 0.099±0.00 N/A
ENST00000515886 N/A N/A N/A 0.118±0.00 N/A N/A N/A 0.143±0.10 0.126±0.00 N/A 0.895±0.00 0.352±0.00 0.114±0.05 0.815±0.00
ENSG00000261643 ENST00000564650 0.163±0.00 0.804±0.00 1.530±0.00 0.687±0.08 0.828±0.00 0.706±0.26 0.542±0.00 1.551±0.00 0.235±0.00 0.331±0.18 0.466±0.23 0.924±0.70 2.331±0.72 0.679±0.29
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029103 ENSMUST00000030986 34.302±7.34 21.753±3.26 17.813±0.26 20.507±12.60 16.376±1.46 15.848±2.23 8.785±0.55 76.023±3.42 10.556±2.82 25.653±1.85 9.304±0.63 32.079±3.53 50.320±32.01 12.618±1.68
ENSMUST00000132754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135207 29.826±0.00 29.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147028 N/A N/A N/A 71.731±0.00 N/A N/A N/A N/A N/A N/A N/A 71.227±0.00 103.904±62.72 43.545±0.00
ENSMUST00000152028 N/A 22.749±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153664 33.703±5.40 N/A 18.367±0.52 10.030±0.00 N/A 13.540±0.00 11.432±1.47 115.125±11.15 12.793±3.96 25.567±1.26 5.185±0.00 36.347±10.87 78.528±30.87 12.292±0.72
ENSMUSG00000044716 ENSMUST00000050709 N/A 0.933±0.23 N/A 0.591±0.00 0.098±0.00 N/A N/A 0.142±0.00 0.008±0.00 N/A 0.821±0.07 0.580±0.00 0.048±0.02 0.700±0.23
ENSMUST00000101298 0.194±0.00 1.517±0.00 N/A 0.850±0.00 0.299±0.27 0.955±0.11 5.433±0.00 0.275±0.00 N/A 0.217±0.12 N/A 7.471±2.40 0.074±0.03 N/A
ENSMUST00000114270 0.187±0.04 1.235±0.54 2.934±0.36 1.858±0.54 0.308±0.26 2.227±0.90 7.499±0.99 0.376±0.11 0.044±0.04 0.446±0.16 5.326±1.24 6.049±3.50 0.142±0.06 3.550±0.12
ENSMUST00000133381 N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155097 N/A 1.846±0.00 N/A 0.863±0.00 0.466±0.00 N/A N/A 0.101±0.00 0.012±0.00 N/A 0.760±0.00 0.319±0.00 0.023±0.00 N/A

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