C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031049 Cad-003 ENSMUSG00000013629 10090 + 5:31054955-31078195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungENSMUST00000031049
Transcript ID Colon Kidney Lung
ENSMUST00000031049 2.490±0.00 0.484±0.00 1.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EH CIL_0000EH_0002 CGP 5:31048312-31078479
CIL_0000EG CIL_0000EG_0002 CGP 5:31054780-31108237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004070 IEA aspartate carbamoyltransferase activity
GO:0005524 IEA ATP binding
GO:0006207 IEA 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006543 IEA glutamine catabolic process
GO:0016597 IEA amino acid binding
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0046872 IEA metal ion binding
GO:0070409 IEA carbamoyl phosphate biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264705 CAD-001 protein_coding Homo_sapiens 0 5747
ENST00000403525 CAD-002 protein_coding Homo_sapiens 0 7934
ENST00000428460 CAD-011 protein_coding Homo_sapiens 0 627
ENST00000456311 CAD-004 protein_coding Homo_sapiens 0 392
ENST00000458503 CAD-008 protein_coding Homo_sapiens 0 839
ENST00000464159 CAD-003 processed_transcript Homo_sapiens 0 641
ENST00000475695 CAD-006 retained_intron Homo_sapiens 0 414
ENST00000479002 CAD-007 retained_intron Homo_sapiens 0 470
ENST00000491891 CAD-005 retained_intron Homo_sapiens 0 436

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