C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456311 CAD-004 ENSG00000084774 9606 + 2:27239118-27241951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungTestisENST00000456311
Transcript ID Breast Lung Testis
ENST00000456311 4.721±0.00 4.603±0.00 8.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EH CIL_0000EH_0001 CGP 2:27212027-27243943
CIL_0000EG CIL_0000EG_0001 CGP 2:27217390-27275817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006520 IEA cellular amino acid metabolic process
GO:0016597 IEA amino acid binding
GO:0016743 IEA carboxyl- or carbamoyltransferase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031049 Cad-003 protein_coding Mus_musculus 0 392
ENSMUST00000013773 Cad-001 protein_coding Mus_musculus 0 392
ENSMUST00000174367 Cad-011 protein_coding Mus_musculus 0 381
ENSMUST00000170329 Cad-012 protein_coding Mus_musculus 0 333
ENSMUST00000152509 Cad-009 retained_intron Mus_musculus 0 326

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