C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403525 CAD-002 ENSG00000084774 9606 + 2:27217408-27243785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000403525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000403525 1.069±0.00 1.736±0.00 0.673±0.00 1.117±0.00 1.232±0.37 0.678±0.00 0.755±0.00 0.561±0.41 0.810±0.00 1.179±0.32 3.904±2.08 1.690±0.80 2.769±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EH CIL_0000EH_0001 CGP 2:27212027-27243943
CIL_0000EG CIL_0000EG_0001 CGP 2:27217390-27275817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004070 IEA aspartate carbamoyltransferase activity
GO:0005524 IEA ATP binding
GO:0006207 IEA 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006520 IEA cellular amino acid metabolic process
GO:0006543 IEA glutamine catabolic process
GO:0006807 IEA nitrogen compound metabolic process
GO:0008152 IEA metabolic process
GO:0008716 IEA D-alanine-D-alanine ligase activity
GO:0016597 IEA amino acid binding
GO:0016743 IEA carboxyl- or carbamoyltransferase activity
GO:0016787 IEA hydrolase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0046872 IEA metal ion binding
GO:0070409 IEA carbamoyl phosphate biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031049 Cad-003 protein_coding Mus_musculus 0 7934
ENSMUST00000013773 Cad-001 protein_coding Mus_musculus 0 5843
ENSMUST00000174367 Cad-011 protein_coding Mus_musculus 0 4732
ENSMUST00000170329 Cad-012 protein_coding Mus_musculus 0 4684
ENSMUST00000114646 Cad-002 protein_coding Mus_musculus 0 2270
ENSMUST00000152004 Cad-008 retained_intron Mus_musculus 0 628
ENSMUST00000139994 Cad-007 retained_intron Mus_musculus 0 553
ENSMUST00000126382 Cad-004 retained_intron Mus_musculus 0 448
ENSMUST00000148145 Cad-006 processed_transcript Mus_musculus 0 446
ENSMUST00000152509 Cad-009 retained_intron Mus_musculus 0 326

Loading