C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor EC
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031533 Tfec-201 ENSMUSG00000029553 10090 - 6:16833381-16898441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031533 0.294±0.05 0.121±0.04 0.478±0.19 0.130±0.03 0.747±0.30 0.158±0.04 0.054±0.03 3.797±1.54 2.182±1.74 2.232±0.82 0.055±0.04 0.355±0.14 1.515±1.73 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K6 CIL_0007K6_0003 UCNEbase 6:14952789-16992593
CIL_000410 CIL_000410_0002 CGP 6:15720661-16898441
CIL_0008UX CIL_0008UX_0002 VISTA 6:16247563-16849382
CIL_0008E4 CIL_0008E4_0002 VISTA 6:16425956-17029599
CIL_0007VN CIL_0007VN_0002 VISTA 6:16535376-17135875
CIL_00040R CIL_00040R_0002 CGP 6:16833381-17105828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0034605 IDA cellular response to heat
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265440 TFEC-001 protein_coding Homo_sapiens 0 802
ENST00000320239 TFEC-007 protein_coding Homo_sapiens 0 891
ENST00000393485 TFEC-002 protein_coding Homo_sapiens 0 556
ENST00000457268 TFEC-201 protein_coding Homo_sapiens 0 802
ENST00000462828 TFEC-006 processed_transcript Homo_sapiens 0 230
ENST00000484212 TFEC-008 protein_coding Homo_sapiens 0 468

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