C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor EC
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393485 TFEC-002 ENSG00000105967 9606 - 7:115939949-116030744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000393485
Transcript ID Adrenal Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000393485 0.377±0.00 0.106±0.00 0.109±0.00 0.235±0.00 0.127±0.00 0.378±0.00 0.180±0.10 0.331±0.18 0.270±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000410 CIL_000410_0001 CGP 7:114922154-116159896
CIL_0007K6 CIL_0007K6_0002 UCNEbase 7:114986759-116135792
CIL_000998 CIL_000998_0001 VISTA 7:115355213-115956543
CIL_0008UX CIL_0008UX_0001 VISTA 7:115373184-115975002
CIL_0008E4 CIL_0008E4_0001 VISTA 7:115511477-116114742
CIL_0007VN CIL_0007VN_0001 VISTA 7:115642067-116242568
CIL_00040R CIL_00040R_0001 CGP 7:115935148-116258783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003713 TAS transcription coactivator activity
GO:0003714 TAS transcription corepressor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031533 Tfec-201 protein_coding Mus_musculus 0 556

Loading