C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007VN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs301 VISTA 9606 7:115642067-116242568
GeneTranscriptPositionBiotype
ENSG00000105967 (TFEC)
transcription factor EC 		ENST00000265440 (TFEC-001) 115935148-116030741 protein_coding
ENST00000320239 (TFEC-007) 115935156-116030813 protein_coding
ENST00000393485 (TFEC-002) 115939949-116030744 protein_coding
ENST00000457268 (TFEC-201) 115935148-115968313 protein_coding
ENST00000462828 (TFEC-006) 115939949-115950894 processed_transcript
ENST00000465322 (TFEC-005) 116120190-116159895 processed_transcript
ENST00000474337 (TFEC-004) 116110773-116159895 processed_transcript
ENST00000484212 (TFEC-008) 115941756-116159896 protein_coding
ENST00000497829 (TFEC-009) 115956749-115968313 processed_transcript
ENSG00000135269 (TES)
testis derived transcript (3 LIM domains) 		ENST00000358204 (TES-001) 116210493-116258783 protein_coding
ENST00000393481 (TES-002) 116222804-116258783 protein_coding
ENST00000393484 (TES-005) 116250435-116252738 protein_coding
ENST00000455989 (TES-008) 116210539-116250288 protein_coding
ENST00000461440 (TES-010) 116210506-116249577 retained_intron
ENST00000463746 (TES-004) 116251751-116252580 retained_intron
ENST00000485009 (TES-006) 116222951-116250032 retained_intron
ENST00000492891 (TES-011) 116210549-116257668 nonsense_mediated_decay
ENST00000494384 (TES-009) 116250449-116252600 processed_transcript
ENST00000496871 (TES-007) 116210561-116249806 retained_intron
ENST00000496912 (TES-003) 116251507-116257576 retained_intron
ENSG00000237813 (AC002066.1)
 ENST00000439070 (AC002066.1-001) 116416117-116465276 antisense
ENST00000446355 (AC002066.1-003) 116238260-116499465 antisense
ENSG00000240973 (RP11-458K10.2)
 ENST00000470532 (RP11-458K10.2-001) 115679345-115682618 lincRNA
ENSG00000243243 (AC073130.3)
 ENST00000444244 (AC073130.3-001) 116238004-116327896 antisense
ENST00000456289 (AC073130.3-002) 116237929-116239249 antisense
ENSG00000243345 (RP11-458K10.3)
 ENST00000489626 (RP11-458K10.3-001) 115789729-115791049 lincRNA
ENSG00000279086 (RP11-667F14.1)
 ENST00000624389 (RP11-667F14.1-001) 116209234-116211511 TEC
CIL_0007VN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs301 VISTA 10090 6:16535376-17135875
GeneTranscriptPositionBiotype
ENSMUSG00000029553 (Tfec)
transcription factor EC 		ENSMUST00000031533 (Tfec-201) 16833381-16898441 protein_coding
ENSMUSG00000081744 (Gm5721)
predicted gene 5721 		ENSMUST00000119845 (Gm5721-001) 16925231-16926926 processed_pseudogene
ENSMUSG00000084772 (Gm15473)
predicted gene 15473 		ENSMUST00000140746 (Gm15473-001) 17058806-17064996 processed_transcript
ENSMUSG00000101034 (RP24-434O21.1)
predicted gene 29589 		ENSMUST00000186663 (RP24-434O21.1-001) 16553905-16554939 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VN_0001ENSG00000105967ENST00000265440ENST00000320239ENST00000393485ENST00000457268ENST00000462828ENST00000465322ENST00000474337ENST00000484212ENST00000497829ENSG00000135269ENST00000358204ENST00000393481ENST00000393484ENST00000455989ENST00000461440ENST00000463746ENST00000485009ENST00000492891ENST00000494384ENST00000496871ENST00000496912ENSG00000237813ENST00000439070ENST00000446355ENSG00000240973ENST00000470532ENSG00000243243ENST00000444244ENST00000456289ENSG00000243345ENST00000489626ENSG00000279086ENST00000624389CIL_0007VN_0002ENSMUSG00000029553ENSMUST00000031533ENSMUSG00000081744ENSMUST00000119845ENSMUSG00000084772ENSMUST00000140746ENSMUSG00000101034ENSMUST00000186663
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VN_0001ENSG00000105967ENST00000265440ENST00000320239ENST00000393485ENST00000457268ENST00000462828ENST00000484212ENSG00000135269ENST00000358204ENST00000393481ENST00000455989ENST00000461440ENST00000463746ENST00000492891ENST00000496912ENSG00000237813ENST00000439070ENSG00000240973ENST00000470532ENSG00000243243ENST00000444244ENSG00000243345ENST00000489626ENSG00000279086ENST00000624389CIL_0007VN_0002ENSMUSG00000029553ENSMUST00000031533ENSMUSG00000081744ENSMUST00000119845ENSMUSG00000084772ENSMUST00000140746ENSMUSG00000101034ENSMUST00000186663
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105967 ENST00000265440 0.120±0.00 0.359±0.00 N/A 0.142±0.00 1.251±0.00 N/A 0.184±0.05 N/A 0.268±0.15 3.365±0.00 N/A 0.129±0.01 0.315±0.11 0.147±0.00
ENST00000320239 0.098±0.00 N/A N/A 0.127±0.00 0.068±0.00 0.105±0.00 0.039±0.00 0.409±0.00 N/A 0.336±0.00 N/A 0.141±0.00 N/A N/A
ENST00000393485 N/A 0.377±0.00 N/A 0.106±0.00 N/A N/A 0.109±0.00 0.235±0.00 0.127±0.00 0.378±0.00 N/A 0.180±0.10 0.331±0.18 0.270±0.00
ENST00000457268 N/A N/A 2.984±0.00 N/A N/A N/A N/A 1.354±0.00 N/A N/A 0.018±0.00 0.038±0.00 N/A N/A
ENST00000462828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00
ENST00000465322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484212 N/A N/A N/A N/A 1.328±0.00 N/A N/A N/A N/A N/A N/A 0.334±0.17 N/A 0.157±0.00
ENST00000497829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135269 ENST00000358204 9.861±0.00 25.357±0.00 2.603±0.00 0.721±0.00 12.776±2.42 28.589±11.40 3.149±1.80 7.245±6.96 11.617±9.97 13.067±4.34 0.076±0.00 18.387±8.80 14.282±4.66 14.731±3.34
ENST00000393481 N/A N/A 1.233±0.00 0.228±0.00 N/A N/A N/A N/A 24.170±0.00 N/A N/A N/A N/A N/A
ENST00000393484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455989 N/A N/A N/A N/A N/A N/A N/A 0.700±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461440 N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A 24.560±0.00
ENST00000463746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.383±0.00 N/A N/A 28.894±0.00
ENST00000485009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492891 N/A N/A N/A N/A N/A N/A N/A 0.774±0.00 N/A N/A 0.181±0.00 N/A N/A 23.586±0.00
ENST00000494384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496912 N/A N/A N/A 0.630±0.55 N/A N/A 0.915±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000237813 ENST00000439070 0.173±0.00 0.031±0.00 N/A 0.031±0.00 1.112±1.00 N/A 0.176±0.00 N/A 0.067±0.00 0.376±0.00 N/A 0.054±0.03 0.129±0.01 0.288±0.19
ENST00000446355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240973 ENST00000470532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.09
ENSG00000243243 ENST00000444244 N/A N/A N/A N/A N/A 2.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243345 ENST00000489626 N/A N/A N/A 0.142±0.00 0.027±0.00 N/A 0.025±0.00 0.187±0.00 N/A N/A N/A 0.137±0.00 N/A 0.795±0.29
ENSG00000279086 ENST00000624389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029553 ENSMUST00000031533 0.294±0.05 0.121±0.04 0.478±0.19 0.130±0.03 0.747±0.30 0.158±0.04 0.054±0.03 3.797±1.54 2.182±1.74 2.232±0.82 0.055±0.04 0.355±0.14 1.515±1.73 0.029±0.01
ENSMUSG00000081744 ENSMUST00000119845 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000084772 ENSMUST00000140746 0.133±0.09 0.152±0.00 0.205±0.04 0.015±0.01 0.071±0.02 N/A 0.032±0.00 0.039±0.00 0.033±0.04 N/A 0.017±0.00 0.274±0.18 0.192±0.10 0.680±0.16
ENSMUSG00000101034 ENSMUST00000186663 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.733±0.00 0.014±0.00 N/A

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