C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031697 Cul1-001 ENSMUSG00000029686 10090 + 6:47454320-47526139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031697
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031697 14.421±3.51 14.800±1.80 25.363±4.50 24.121±13.26 11.082±3.11 8.279±3.41 9.585±0.49 15.105±2.85 14.236±6.13 15.947±1.92 20.994±0.70 14.786±9.12 40.008±31.45 12.428±3.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XU CIL_0004XU_0002 CGP 6:47453398-47595341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IC ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0006511 IC ubiquitin-dependent protein catabolic process
GO:0006513 IGI protein monoubiquitination
GO:0006915 IMP apoptotic process
GO:0008283 IMP cell proliferation
GO:0009887 IMP organ morphogenesis
GO:0016032 IEA viral process
GO:0016567 IEA protein ubiquitination
GO:0019005 IDA:ISS SCF ubiquitin ligase complex
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031625 IEA ubiquitin protein ligase binding
GO:1990452 IEA Parkin-FBXW7-Cul1 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325222 CUL1-002 protein_coding Homo_sapiens 0 3709
ENST00000409469 CUL1-001 protein_coding Homo_sapiens 0 3358
ENST00000509510 CUL1P1-001 processed_pseudogene Homo_sapiens 0 1458
ENST00000602748 CUL1-003 protein_coding Homo_sapiens 0 3672
ENST00000617797 CUL1-201 protein_coding Homo_sapiens 0 3003

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