C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: even skipped homeotic gene 1 homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031787 Evx1-001 ENSMUSG00000005503 10090 + 6:52313498-52318378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000031787
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031787 0.297±0.02 0.686±0.31 1.052±0.34 0.013±0.00 0.009±0.00 0.033±0.00 0.954±0.34 0.098±0.05 0.045±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P5 CIL_0003P5_0002 CGP 6:52257694-52318378
CIL_0003P6 CIL_0003P6_0002 CGP 6:52313498-52640389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0009792 IMP embryo development ending in birth or egg hatching
GO:0021913 IMP regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222761 EVX1-003 protein_coding Homo_sapiens 0 950
ENST00000496902 EVX1-001 protein_coding Homo_sapiens 0 1738
ENST00000580535 EVX1-004 protein_coding Homo_sapiens 0 963

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