C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: even-skipped homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496902 EVX1-001 ENSG00000106038 9606 + 7:27242700-27246573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverENST00000496902
Transcript ID Breast Liver
ENST00000496902 0.105±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003P5 CIL_0003P5_0001 CGP 7:27193503-27247176
CIL_0003P6 CIL_0003P6_0001 CGP 7:27242700-27662995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0009792 IEA embryo development ending in birth or egg hatching
GO:0021913 IEA regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031787 Evx1-001 protein_coding Mus_musculus 0 1738
ENSMUST00000129243 Evx1-002 protein_coding Mus_musculus 0 660
ENSMUST00000173623 Evx2-201 protein_coding Mus_musculus 0 294
ENSMUST00000001867 Evx2-001 protein_coding Mus_musculus 0 294

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