C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-hydroxyisobutyrate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031788 Hibadh-001 ENSMUSG00000029776 10090 - 6:52546228-52640389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031788 62.354±26.52 58.020±1.44 44.194±1.04 9.683±1.22 55.524±11.76 23.743±1.60 79.262±17.64 171.050±13.17 102.440±71.71 25.888±0.44 61.453±5.32 28.990±10.35 25.870±6.03 10.383±4.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P6 CIL_0003P6_0002 CGP 6:52313498-52640389
CIL_0003ZJ CIL_0003ZJ_0002 CGP 6:52546228-52766780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005739 IDA mitochondrion
GO:0006098 IEA pentose-phosphate shunt
GO:0006574 ISS valine catabolic process
GO:0008442 ISS 3-hydroxyisobutyrate dehydrogenase activity
GO:0051287 IEA NAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265395 HIBADH-001 protein_coding Homo_sapiens 0 1399
ENST00000428288 HIBADH-003 nonsense_mediated_decay Homo_sapiens 0 1072
ENST00000496814 HIBADH-004 retained_intron Homo_sapiens 0 329

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