C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-hydroxyisobutyrate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428288 HIBADH-003 ENSG00000106049 9606 - 7:27525475-27662868 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428288
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428288 8.910±0.00 5.779±0.00 1.844±0.00 9.010±8.02 8.622±0.00 14.111±0.00 28.596±0.00 15.647±0.00 4.245±0.00 12.619±0.00 9.260±1.91 14.734±6.91 8.366±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003P6 CIL_0003P6_0001 CGP 7:27242700-27662995
CIL_0003ZJ CIL_0003ZJ_0001 CGP 7:27525442-27844564

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031788 Hibadh-001 protein_coding Mus_musculus 0 1072
ENSMUST00000118903 Gm11225-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000155948 Hibadh-003 retained_intron Mus_musculus 0 320

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