C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-hydroxyisobutyrate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265395 HIBADH-001 ENSG00000106049 9606 - 7:27525442-27662995 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265395 14.394±0.00 6.523±0.00 5.176±0.00 3.835±2.63 14.579±10.17 9.215±5.45 14.398±10.08 14.947±2.87 9.855±7.21 4.394±2.93 9.756±5.91 9.338±8.35 12.409±3.69 9.882±3.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003P6 CIL_0003P6_0001 CGP 7:27242700-27662995
CIL_0003ZJ CIL_0003ZJ_0001 CGP 7:27525442-27844564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005739 IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006098 IEA pentose-phosphate shunt
GO:0006574 IEA valine catabolic process
GO:0008442 IDA:IEA 3-hydroxyisobutyrate dehydrogenase activity
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031788 Hibadh-001 protein_coding Mus_musculus 0 1399
ENSMUST00000118903 Gm11225-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000155948 Hibadh-003 retained_intron Mus_musculus 0 320

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