C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 7 (eta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032078 Cct7-201 ENSMUSG00000030007 10090 + 6:85451505-85468477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032078 50.966±12.23 42.687±3.12 36.967±0.00 111.260±20.61 43.345±3.52 44.969±2.37 40.282±1.07 50.782±3.17 72.966±45.33 40.931±9.57 42.675±1.41 95.328±37.74 140.505±130.99 243.309±27.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087O CIL_00087O_0002 VISTA 6:84864955-85466474
CIL_0008RW CIL_0008RW_0002 VISTA 6:84918005-85518946
CIL_0003EK CIL_0003EK_0002 CGP 6:85431989-85451970
CIL_0003EL CIL_0003EL_0002 CGP 6:85446810-85468477
CIL_0003EI CIL_0003EI_0002 CGP 6:85451505-85502994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0042802 IPI identical protein binding
GO:0044297 IDA cell body
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258091 CCT7-001 protein_coding Homo_sapiens 0 2087
ENST00000398422 CCT7-010 protein_coding Homo_sapiens 0 1221
ENST00000399032 CCT7-003 protein_coding Homo_sapiens 0 604
ENST00000406551 CCT7P1-001 processed_pseudogene Homo_sapiens 0 1413
ENST00000409924 CCT7-015 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000461290 CCT7-011 retained_intron Homo_sapiens 0 667
ENST00000469844 CCT7-004 processed_transcript Homo_sapiens 0 726
ENST00000471927 CCT7-007 processed_transcript Homo_sapiens 0 534
ENST00000473197 CCT7-006 processed_transcript Homo_sapiens 0 388
ENST00000473786 CCT7-013 processed_transcript Homo_sapiens 0 966
ENST00000480489 CCT7-012 retained_intron Homo_sapiens 0 586
ENST00000482064 CCT7-008 processed_transcript Homo_sapiens 0 566
ENST00000488856 CCT7-016 retained_intron Homo_sapiens 0 566
ENST00000492253 CCT7-005 processed_transcript Homo_sapiens 0 496
ENST00000539919 CCT7-201 protein_coding Homo_sapiens 0 2047
ENST00000540468 CCT7-202 protein_coding Homo_sapiens 0 1666

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