C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032196 Arl8b-201 ENSMUSG00000030105 10090 + 6:108783059-108823723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032196 25.611±2.86 31.178±9.09 20.382±6.68 16.982±0.65 27.102±4.08 20.214±2.39 18.260±1.01 18.831±2.52 13.440±3.48 26.253±1.86 21.748±6.21 22.686±5.37 22.355±7.83 20.194±8.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050C CIL_00050C_0002 CGP 6:108660629-108823723
CIL_0005RI CIL_0005RI_0002 CGP 6:108783059-108859356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane
GO:0019003 IEA GDP binding
GO:0030496 IEA midbody
GO:0043014 IEA alpha-tubulin binding
GO:0048487 IEA beta-tubulin binding
GO:0051233 IEA spindle midzone
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256496 ARL8B-001 protein_coding Homo_sapiens 0 2547
ENST00000399029 RP5-1053E7.3-001 processed_pseudogene Homo_sapiens 0 760
ENST00000419534 ARL8B-005 protein_coding Homo_sapiens 0 702
ENST00000428299 RP11-270F18.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000429403 ARL8B-006 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000444332 ARL8B-007 retained_intron Homo_sapiens 0 416
ENST00000455168 ARL8B-003 nonsense_mediated_decay Homo_sapiens 0 1279
ENST00000468010 ARL8B-009 processed_transcript Homo_sapiens 0 494
ENST00000476343 ARL8B-008 retained_intron Homo_sapiens 4.2039e-45 183
ENST00000611208 ARL8B-201 protein_coding Homo_sapiens 0 2547

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