C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134108-ENSG00000134109 CGP 9606 3:5122220-5219957
GeneTranscriptPositionBiotype
ENSG00000134108 (ARL8B)
ADP-ribosylation factor-like 8B 		ENST00000256496 (ARL8B-001) 5122220-5180911 protein_coding
ENST00000419534 (ARL8B-005) 5122296-5179805 protein_coding
ENST00000429403 (ARL8B-006) 5122249-5172735 nonsense_mediated_decay
ENST00000444332 (ARL8B-007) 5122292-5170937 retained_intron
ENST00000455168 (ARL8B-003) 5122292-5179646 nonsense_mediated_decay
ENST00000468010 (ARL8B-009) 5170552-5178969 processed_transcript
ENST00000476343 (ARL8B-008) 5174253-5178708 retained_intron
ENST00000611208 (ARL8B-201) 5122245-5180912 protein_coding
ENSG00000134109 (EDEM1)
ER degradation enhancer, mannosidase alpha-like 1 		ENST00000256497 (EDEM1-001) 5187673-5219957 protein_coding
ENST00000434243 (EDEM1-004) 5187646-5208172 nonsense_mediated_decay
ENST00000443790 (EDEM1-007) 5187764-5189583 nonsense_mediated_decay
ENST00000445686 (EDEM1-003) 5188349-5211298 protein_coding
ENST00000465187 (EDEM1-005) 5187806-5195284 retained_intron
ENST00000465369 (EDEM1-002) 5187720-5211406 retained_intron
ENST00000492751 (EDEM1-006) 5195106-5201779 retained_intron
ENSG00000233912 (AC026202.3)
 ENST00000439325 (AC026202.3-001) 5156905-5187329 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005RI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030105-ENSMUSG00000030104 CGP 10090 6:108783059-108859356
GeneTranscriptPositionBiotype
ENSMUSG00000030104 (Edem1)
ER degradation enhancer, mannosidase alpha-like 1 		ENSMUST00000089162 (Edem1-201) 108828641-108859356 protein_coding
ENSMUSG00000030105 (Arl8b)
ADP-ribosylation factor-like 8B 		ENSMUST00000032196 (Arl8b-201) 108783059-108823723 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RI_0001ENSG00000134108ENST00000256496ENST00000419534ENST00000429403ENST00000444332ENST00000455168ENST00000468010ENST00000476343ENST00000611208ENSG00000134109ENST00000256497ENST00000434243ENST00000443790ENST00000445686ENST00000465187ENST00000465369ENST00000492751ENSG00000233912ENST00000439325CIL_0005RI_0002ENSMUSG00000030104ENSMUST00000089162ENSMUSG00000030105ENSMUST00000032196
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RI_0001ENSG00000134108ENST00000256496ENST00000419534ENST00000455168ENST00000611208ENSG00000134109ENST00000256497ENST00000465369ENST00000492751ENSG00000233912ENST00000439325CIL_0005RI_0002ENSMUSG00000030104ENSMUST00000089162ENSMUSG00000030105ENSMUST00000032196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134108 ENST00000256496 5.236±0.00 12.817±0.00 N/A 35.829±0.00 16.733±0.00 15.380±0.00 10.588±0.00 25.266±0.00 7.345±0.00 11.076±0.00 23.774±0.00 11.038±0.00 N/A 16.725±0.00
ENST00000419534 N/A N/A 2.953±0.00 N/A 3.653±0.00 2.630±0.00 N/A 4.034±0.00 6.139±0.00 9.275±0.00 9.667±0.00 N/A N/A N/A
ENST00000429403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455168 N/A N/A N/A N/A N/A 3.563±0.00 2.398±0.00 N/A N/A N/A 6.195±0.00 2.672±0.00 N/A N/A
ENST00000468010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611208 N/A N/A N/A 29.814±0.00 8.682±0.00 N/A 2.977±0.00 5.319±0.00 4.254±0.00 N/A 5.429±0.00 9.409±6.80 18.271±3.03 N/A
ENSG00000134109 ENST00000256497 5.572±0.00 6.248±0.00 N/A 0.897±0.71 6.293±0.00 1.615±0.86 0.971±0.74 6.078±0.00 15.418±0.00 8.350±0.00 1.023±0.78 2.829±2.44 1.942±0.75 2.708±1.47
ENST00000434243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465369 N/A N/A N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.517±0.00 N/A N/A N/A
ENSG00000233912 ENST00000439325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.864±0.00 N/A N/A 3.482±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030104 ENSMUST00000089162 15.090±1.27 28.891±8.04 7.912±0.59 2.960±1.16 16.392±9.30 35.548±12.99 2.133±0.24 8.082±1.28 22.550±13.40 12.544±3.76 0.827±0.21 15.654±7.03 14.800±6.06 3.274±1.35
ENSMUSG00000030105 ENSMUST00000032196 25.611±2.86 31.178±9.09 20.382±6.68 16.982±0.65 27.102±4.08 20.214±2.39 18.260±1.01 18.831±2.52 13.440±3.48 26.253±1.86 21.748±6.21 22.686±5.37 22.355±7.83 20.194±8.39

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