C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611208 ARL8B-201 ENSG00000134108 9606 + 3:5122245-5180912 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaENST00000611208
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENST00000611208 29.814±0.00 8.682±0.00 2.977±0.00 5.319±0.00 4.254±0.00 5.429±0.00 9.409±6.80 18.271±3.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050C CIL_00050C_0001 CGP 3:4979116-5180912
CIL_0005RI CIL_0005RI_0001 CGP 3:5122220-5219957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0006184 NAS:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007049 IEA cell cycle
GO:0007059 IMP chromosome segregation
GO:0007165 IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA:IEA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019003 IDA GDP binding
GO:0030496 IDA midbody
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0043014 IDA alpha-tubulin binding
GO:0048487 IDA beta-tubulin binding
GO:0051233 IDA spindle midzone
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032196 Arl8b-201 protein_coding Mus_musculus 0 2547
ENSMUST00000027684 Arl8a-001 protein_coding Mus_musculus 0 394

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