C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134107-ENSG00000134108 CGP 9606 3:4979116-5180912
GeneTranscriptPositionBiotype
ENSG00000134107 (BHLHE40)
basic helix-loop-helix family, member e40 		ENST00000256495 (BHLHE40-001) 4979116-4985323 protein_coding
ENST00000460806 (BHLHE40-003) 4980232-4981610 retained_intron
ENST00000467610 (BHLHE40-002) 4979437-4983268 retained_intron
ENSG00000134108 (ARL8B)
ADP-ribosylation factor-like 8B 		ENST00000256496 (ARL8B-001) 5122220-5180911 protein_coding
ENST00000419534 (ARL8B-005) 5122296-5179805 protein_coding
ENST00000429403 (ARL8B-006) 5122249-5172735 nonsense_mediated_decay
ENST00000444332 (ARL8B-007) 5122292-5170937 retained_intron
ENST00000455168 (ARL8B-003) 5122292-5179646 nonsense_mediated_decay
ENST00000468010 (ARL8B-009) 5170552-5178969 processed_transcript
ENST00000476343 (ARL8B-008) 5174253-5178708 retained_intron
ENST00000611208 (ARL8B-201) 5122245-5180912 protein_coding
ENSG00000224082 (UBTFL8)
upstream binding transcription factor, RNA polymerase I-like 8 (pseudogene) 		ENST00000426903 (UBTFL8-001) 5080212-5084429 unprocessed_pseudogene
ENSG00000230182 (RNF10P1)
ring finger protein 10 pseudogene 1 		ENST00000418589 (RNF10P1-001) 5068676-5069044 processed_pseudogene
ENSG00000233912 (AC026202.3)
 ENST00000439325 (AC026202.3-001) 5156905-5187329 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00050C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030103-ENSMUSG00000030105 CGP 10090 6:108660629-108823723
GeneTranscriptPositionBiotype
ENSMUSG00000030103 (Bhlhe40)
basic helix-loop-helix family, member e40 		ENSMUST00000032194 (Bhlhe40-001) 108660629-108666925 protein_coding
ENSMUST00000163617 (Bhlhe40-003) 108660874-108662699 protein_coding
ENSMUST00000166346 (Bhlhe40-002) 108660799-108661334 retained_intron
ENSMUSG00000030105 (Arl8b)
ADP-ribosylation factor-like 8B 		ENSMUST00000032196 (Arl8b-201) 108783059-108823723 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050C_0001ENSG00000134107ENST00000256495ENST00000460806ENST00000467610ENSG00000134108ENST00000256496ENST00000419534ENST00000429403ENST00000444332ENST00000455168ENST00000468010ENST00000476343ENST00000611208ENSG00000224082ENST00000426903ENSG00000230182ENST00000418589ENSG00000233912ENST00000439325CIL_00050C_0002ENSMUSG00000030103ENSMUST00000032194ENSMUST00000163617ENSMUST00000166346ENSMUSG00000030105ENSMUST00000032196
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050C_0001ENSG00000134107ENST00000256495ENST00000467610ENSG00000134108ENST00000256496ENST00000419534ENST00000455168ENST00000611208ENSG00000224082ENST00000426903ENSG00000230182ENST00000418589ENSG00000233912ENST00000439325CIL_00050C_0002ENSMUSG00000030103ENSMUST00000032194ENSMUSG00000030105ENSMUST00000032196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134107 ENST00000256495 N/A N/A 6.437±0.00 9.367±0.00 15.642±0.00 1.620±0.00 5.136±3.31 19.789±11.11 21.667±7.98 9.552±0.53 3.298±0.25 53.746±29.02 20.012±7.16 4.020±0.00
ENST00000460806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467610 N/A N/A 4.582±0.00 N/A 6.298±0.00 N/A 0.766±0.00 N/A N/A N/A 9.212±0.00 N/A N/A 2.537±0.00
ENSG00000134108 ENST00000256496 5.236±0.00 12.817±0.00 N/A 35.829±0.00 16.733±0.00 15.380±0.00 10.588±0.00 25.266±0.00 7.345±0.00 11.076±0.00 23.774±0.00 11.038±0.00 N/A 16.725±0.00
ENST00000419534 N/A N/A 2.953±0.00 N/A 3.653±0.00 2.630±0.00 N/A 4.034±0.00 6.139±0.00 9.275±0.00 9.667±0.00 N/A N/A N/A
ENST00000429403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455168 N/A N/A N/A N/A N/A 3.563±0.00 2.398±0.00 N/A N/A N/A 6.195±0.00 2.672±0.00 N/A N/A
ENST00000468010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611208 N/A N/A N/A 29.814±0.00 8.682±0.00 N/A 2.977±0.00 5.319±0.00 4.254±0.00 N/A 5.429±0.00 9.409±6.80 18.271±3.03 N/A
ENSG00000224082 ENST00000426903 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.018±0.01
ENSG00000230182 ENST00000418589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 0.111±0.00
ENSG00000233912 ENST00000439325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.864±0.00 N/A N/A 3.482±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030103 ENSMUST00000032194 9.272±3.88 23.618±6.29 10.889±2.79 6.612±7.89 20.117±0.53 18.977±1.63 9.587±3.13 19.344±0.73 7.528±3.93 8.406±0.54 27.211±6.24 10.637±9.52 20.439±9.96 0.906±0.27
ENSMUST00000163617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030105 ENSMUST00000032196 25.611±2.86 31.178±9.09 20.382±6.68 16.982±0.65 27.102±4.08 20.214±2.39 18.260±1.01 18.831±2.52 13.440±3.48 26.253±1.86 21.748±6.21 22.686±5.37 22.355±7.83 20.194±8.39

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