C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 1a4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032364 Slco1a4-201 ENSMUSG00000030237 10090 - 6:141806722-141845468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000032364
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000032364 0.078±0.04 0.159±0.00 1.846±0.00 0.036±0.01 0.087±0.02 0.228±0.14 3.849±2.37 0.025±0.00 0.451±0.23 0.008±0.00 0.277±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0006820 IDA anion transport
GO:0008514 IDA organic anion transmembrane transporter activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307378 SLCO1A2-001 protein_coding Homo_sapiens 0 1312
ENST00000458504 SLCO1A2-002 protein_coding Homo_sapiens 0 1029
ENST00000463718 SLCO1A2-003 retained_intron Homo_sapiens 0 1164
ENST00000480394 SLCO1A2-004 retained_intron Homo_sapiens 0 946
ENST00000544020 SLCO1A2-016 nonsense_mediated_decay Homo_sapiens 0 1027
ENST00000544290 SLCO1A2-017 nonsense_mediated_decay Homo_sapiens 0 1027

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