C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier organic anion transporter family, member 1A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544290 SLCO1A2-017 ENSG00000084453 9606 - 12:21269459-21395261 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000544290
Transcript ID Testis
ENST00000544290 0.119±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PW CIL_0005PW_0001 CGP 12:21131202-21419594
CIL_0005PZ CIL_0005PZ_0001 CGP 12:21264600-21419594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032364 Slco1a4-201 protein_coding Mus_musculus 0 1027
ENSMUST00000165990 Slco1a4-001 protein_coding Mus_musculus 0 1027
ENSMUST00000171651 Slco1a1-003 retained_intron Mus_musculus 3.00004e-41 174
ENSMUST00000042119 Slco1a1-001 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000168119 Slco1a1-002 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000181628 Gm6614-002 protein_coding Mus_musculus 4.00001e-40 171
ENSMUST00000181791 Gm6614-001 protein_coding Mus_musculus 5e-29 134
ENSMUST00000111832 Gm6614-201 protein_coding Mus_musculus 2e-28 132

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