C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032414 Ttll3-009 ENSMUSG00000030276 10090 + 6:113392458-113414562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryTestisENSMUST00000032414
Transcript ID Brain Lung Ovary Testis
ENSMUST00000032414 3.942±0.00 6.757±1.15 7.032±1.61 21.931±7.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WP CIL_0002WP_0002 CGP 6:113366025-113390448
CIL_0005IQ CIL_0005IQ_0002 CGP 6:113378113-113414583
CIL_0002WY CIL_0002WY_0002 CGP 6:113389260-113419348

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005874 IEA microtubule
GO:0005929 IDA cilium
GO:0005930 IDA axoneme
GO:0015630 IDA microtubule cytoskeleton
GO:0018094 IDA protein polyglycylation
GO:0035082 ISS axoneme assembly
GO:0042384 ISS cilium assembly
GO:0070735 IDA protein-glycine ligase activity
GO:0070736 IDA protein-glycine ligase activity, initiating

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310252 TTLL3-020 protein_coding Homo_sapiens 0 1513
ENST00000383827 TTLL3-001 protein_coding Homo_sapiens 0 1079
ENST00000397256 ARPC4-TTLL3-001 protein_coding Homo_sapiens 0 1079
ENST00000417065 TTLL3-015 protein_coding Homo_sapiens 0 213
ENST00000422738 TTLL3-028 protein_coding Homo_sapiens 2e-38 163
ENST00000426827 TTLL3-013 protein_coding Homo_sapiens 0 584
ENST00000426895 TTLL3-003 protein_coding Homo_sapiens 0 1434
ENST00000427220 TTLL3-002 nonsense_mediated_decay Homo_sapiens 0 588
ENST00000430390 TTLL3-004 nonsense_mediated_decay Homo_sapiens 0 941
ENST00000430718 TTLL3-025 protein_coding Homo_sapiens 0 459
ENST00000430793 TTLL3-022 protein_coding Homo_sapiens 0 1221
ENST00000431204 TTLL3-026 nonsense_mediated_decay Homo_sapiens 0 617
ENST00000438141 TTLL3-023 nonsense_mediated_decay Homo_sapiens 0 1079
ENST00000438596 TTLL3-014 protein_coding Homo_sapiens 0 451
ENST00000443148 TTLL3-021 protein_coding Homo_sapiens 0 1629
ENST00000452597 TTLL3-019 protein_coding Homo_sapiens 0 429
ENST00000452823 TTLL3-031 protein_coding Homo_sapiens 0 344
ENST00000455274 TTLL3-016 protein_coding Homo_sapiens 0 1075
ENST00000473661 TTLL3-008 nonsense_mediated_decay Homo_sapiens 0 656
ENST00000474948 TTLL3-030 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000482269 TTLL3-009 retained_intron Homo_sapiens 0 551
ENST00000483051 TTLL3-005 retained_intron Homo_sapiens 0 1306
ENST00000492440 TTLL3-007 retained_intron Homo_sapiens 0 475
ENST00000496526 TTLL3-006 retained_intron Homo_sapiens 0 617

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