C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytidine monophospho-N-acetylneuraminic acid synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032419 Cmas-001 ENSMUSG00000030282 10090 + 6:142756686-142775714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032419
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032419 6.538±0.25 2.706±0.53 22.445±2.84 34.277±13.56 3.854±0.52 39.528±2.95 8.277±0.54 10.468±1.72 40.126±32.95 6.725±0.98 11.684±0.55 10.970±8.49 57.020±26.16 11.337±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0005PR CIL_0005PR_0002 CGP 6:142587862-142775714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISA nucleus
GO:0006054 IEA N-acetylneuraminate metabolic process
GO:0006055 ISA CMP-N-acetylneuraminate biosynthetic process
GO:0008781 ISA N-acylneuraminate cytidylyltransferase activity
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229329 CMAS-001 protein_coding Homo_sapiens 0 1563
ENST00000534981 CMAS-002 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000535610 CMAS-006 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000537658 CMAS-004 retained_intron Homo_sapiens 0 472
ENST00000538498 CMAS-003 protein_coding Homo_sapiens 0 675

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