C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032429 Med21-001 ENSMUSG00000030291 10090 + 6:146642547-146650602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032429
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032429 22.701±1.10 33.050±6.11 20.972±11.27 17.450±8.76 13.299±1.59 21.219±2.26 25.875±3.76 32.082±12.59 15.527±0.54 15.522±1.69 14.907±4.24 37.930±12.12 24.728±10.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NL CIL_0003NL_0003 CGP 6:146577203-146642824
CIL_0003NM CIL_0003NM_0003 CGP 6:146602352-146650602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006366 IC transcription from RNA polymerase II promoter
GO:0016592 IDA mediator complex
GO:0019827 IMP stem cell maintenance
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282892 MED21-001 protein_coding Homo_sapiens 0 719
ENST00000529260 RP11-5A11.2-001 processed_pseudogene Homo_sapiens 0 368
ENST00000536503 MED21-002 processed_transcript Homo_sapiens 0 518
ENST00000536711 MED21-006 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000538186 MED21-003 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000546323 MED21-005 protein_coding Homo_sapiens 0 603

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