C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine and glycine-rich protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032658 Csrp3-201 ENSMUSG00000030470 10090 - 7:48830398-48848051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032658
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032658 0.010±0.00 0.067±0.00 3.184±3.00 302.547±59.06 1.342±1.05 0.614±0.81 12.093±6.81 43.662±12.28 0.151±0.00 0.376±0.32 0.120±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0002 VISTA 7:48524185-49126415
CIL_0008YB CIL_0008YB_0002 VISTA 7:48559718-49163012
CIL_0007H7 CIL_0007H7_0003 CGP 7:48789003-48848051
CIL_0007HT CIL_0007HT_0003 CGP 7:48830398-48881596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002026 IGI regulation of the force of heart contraction
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0006874 IGI cellular calcium ion homeostasis
GO:0007517 IEA muscle organ development
GO:0008270 IEA zinc ion binding
GO:0008307 IMP structural constituent of muscle
GO:0030018 IDA Z disc
GO:0031433 IPI telethonin binding
GO:0033365 IMP protein localization to organelle
GO:0035995 IMP detection of muscle stretch
GO:0042805 IDA actinin binding
GO:0048738 IGI cardiac muscle tissue development
GO:0055003 IMP cardiac myofibril assembly
GO:0060048 IMP cardiac muscle contraction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265968 CSRP3-201 protein_coding Homo_sapiens 0 845
ENST00000533783 CSRP3-002 protein_coding Homo_sapiens 0 845

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