C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007HT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069975-ENSDARG00000057323 CGP 7955 7:17324640-17373447
GeneTranscriptPositionBiotype
ENSDARG00000057323 (e2f8)
E2F transcription factor 8
ENSDART00000079953 (e2f8-001) 17351491-17372368 protein_coding
ENSDART00000128488 (e2f8-201) 17351485-17372148 protein_coding
ENSDART00000131726 (e2f8-004) 17352209-17357425 protein_coding
ENSDART00000134548 (e2f8-003) 17368269-17372176 protein_coding
ENSDART00000144118 (e2f8-002) 17368348-17373447 protein_coding
ENSDARG00000069975 (csrp3)
cysteine and glycine-rich protein 3 (cardiac LIM protein)
ENSDART00000053404 (csrp3-201) 17324640-17333892 protein_coding
ENSDART00000102292 (csrp3-202) 17324642-17337425 protein_coding
CIL_0007HT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129170-ENSG00000129173 CGP 9606 11:19182030-19241620
GeneTranscriptPositionBiotype
ENSG00000129170 (CSRP3)
cysteine and glycine-rich protein 3 (cardiac LIM protein)
ENST00000265968 (CSRP3-201) 19182030-19202042 protein_coding
ENST00000533783 (CSRP3-002) 19182040-19210573 protein_coding
ENSG00000129173 (E2F8)
E2F transcription factor 8
ENST00000250024 (E2F8-002) 19224535-19240951 protein_coding
ENST00000527884 (E2F8-001) 19224063-19241620 protein_coding
ENST00000529188 (E2F8-005) 19225520-19226078 processed_transcript
ENST00000532666 (E2F8-004) 19237347-19241598 protein_coding
ENST00000620009 (E2F8-201) 19224066-19241620 protein_coding
ENSG00000255308 (RP11-428C19.4)
ENST00000527978 (RP11-428C19.4-001) 19196775-19281426 antisense
CIL_0007HT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030470-ENSMUSG00000046179 CGP 10090 7:48830398-48881596
GeneTranscriptPositionBiotype
ENSMUSG00000030470 (Csrp3)
cysteine and glycine-rich protein 3
ENSMUST00000032658 (Csrp3-201) 48830398-48848051 protein_coding
ENSMUST00000167786 (Csrp3-202) 48830398-48843671 protein_coding
ENSMUSG00000046179 (E2f8)
E2F transcription factor 8
ENSMUST00000058745 (E2f8-002) 48866429-48881041 protein_coding
ENSMUST00000119223 (E2f8-001) 48866429-48881596 protein_coding
ENSMUST00000136142 (E2f8-003) 48878833-48881004 retained_intron
ENSMUST00000151139 (E2f8-004) 48872107-48875251 retained_intron
ENSMUSG00000085995 (Gm2788)
predicted gene 2788
ENSMUST00000129551 (Gm2788-002) 48877958-48885961 processed_transcript
ENSMUST00000147173 (Gm2788-001) 48881300-48886608 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HT_0001ENSDARG00000057323ENSDART00000079953ENSDART00000128488ENSDART00000131726ENSDART00000134548ENSDART00000144118ENSDARG00000069975ENSDART00000053404ENSDART00000102292CIL_0007HT_0002ENSG00000129170ENST00000265968ENST00000533783ENSG00000129173ENST00000250024ENST00000527884ENST00000529188ENST00000532666ENST00000620009ENSG00000255308ENST00000527978CIL_0007HT_0003ENSMUSG00000030470ENSMUST00000032658ENSMUST00000167786ENSMUSG00000046179ENSMUST00000058745ENSMUST00000119223ENSMUST00000136142ENSMUST00000151139ENSMUSG00000085995ENSMUST00000129551ENSMUST00000147173
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HT_0001ENSDARG00000057323ENSDART00000079953ENSDART00000128488ENSDART00000131726ENSDART00000144118ENSDARG00000069975ENSDART00000053404ENSDART00000102292CIL_0007HT_0002ENSG00000129170ENST00000265968ENST00000533783ENSG00000129173ENST00000250024ENST00000527884ENST00000532666ENST00000620009ENSG00000255308ENST00000527978CIL_0007HT_0003ENSMUSG00000030470ENSMUST00000032658ENSMUST00000167786ENSMUSG00000046179ENSMUST00000058745ENSMUST00000119223ENSMUST00000136142ENSMUST00000151139ENSMUSG00000085995ENSMUST00000129551ENSMUST00000147173
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057323 ENSDART00000079953 N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000128488 N/A N/A N/A 0.179±0.13 N/A N/A 0.840±0.42 3.772±2.24 0.119±0.00 N/A 0.026±0.00 N/A N/A N/A
ENSDART00000131726 N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144118 N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069975 ENSDART00000053404 N/A N/A N/A 0.214±0.12 N/A N/A 260.608±75.58 0.626±0.00 0.063±0.00 N/A 0.717±0.00 N/A N/A N/A
ENSDART00000102292 N/A N/A N/A 0.162±0.00 N/A N/A 118.914±37.32 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129170 ENST00000265968 N/A 0.019±0.00 N/A 0.102±0.00 7.281±0.00 0.167±0.00 298.443±200.73 0.036±0.00 0.360±0.34 0.295±0.23 120.071±100.22 0.068±0.05 3.078±0.00 4.638±4.62
ENST00000533783 N/A N/A N/A 0.047±0.00 N/A 0.033±0.00 N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000129173 ENST00000250024 0.105±0.00 N/A N/A N/A 0.046±0.00 N/A 0.197±0.04 0.161±0.00 0.013±0.00 0.105±0.00 0.889±0.26 0.352±0.37 0.171±0.09 0.189±0.00
ENST00000527884 N/A 0.094±0.00 N/A 0.006±0.00 0.069±0.00 0.116±0.00 0.248±0.00 0.013±0.00 N/A 0.027±0.00 N/A 0.526±0.44 0.308±0.05 0.389±0.04
ENST00000529188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532666 N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.18 N/A N/A 0.852±0.00 N/A 0.695±0.00
ENST00000620009 0.055±0.00 N/A N/A 0.006±0.00 0.062±0.00 N/A N/A 0.012±0.00 N/A 0.028±0.00 N/A N/A N/A N/A
ENSG00000255308 ENST00000527978 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A 0.122±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030470 ENSMUST00000032658 N/A N/A 0.010±0.00 0.067±0.00 3.184±3.00 N/A 302.547±59.06 1.342±1.05 0.614±0.81 12.093±6.81 43.662±12.28 0.151±0.00 0.376±0.32 0.120±0.05
ENSMUST00000167786 N/A N/A N/A N/A N/A N/A N/A N/A 5.028±2.30 N/A N/A N/A N/A N/A
ENSMUSG00000046179 ENSMUST00000058745 0.723±0.08 N/A 0.092±0.01 1.189±0.18 0.180±0.11 1.120±0.36 0.048±0.00 0.106±0.01 9.652±6.82 0.155±0.00 0.063±0.00 0.775±0.30 14.533±10.16 0.683±0.00
ENSMUST00000119223 0.192±0.14 0.124±0.03 0.119±0.06 0.461±0.32 0.172±0.08 1.083±0.14 0.133±0.02 0.065±0.01 4.477±2.80 0.142±0.05 0.033±0.02 0.989±0.70 19.709±18.90 1.801±0.50
ENSMUST00000136142 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A
ENSMUSG00000085995 ENSMUST00000129551 N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 32.643±9.43 N/A N/A N/A N/A N/A
ENSMUST00000147173 N/A N/A N/A N/A N/A N/A N/A N/A 6.289±1.86 N/A 0.028±0.00 N/A N/A 2.475±0.17

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