C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein arginine N-methyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032715 Prmt3-001 ENSMUSG00000030505 10090 + 7:49778346-49858265 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032715 7.112±2.51 6.440±0.47 8.099±1.16 9.922±4.41 5.762±2.30 4.268±1.00 4.125±0.13 5.909±0.98 5.987±4.02 4.109±1.33 3.950±0.77 11.630±3.66 8.082±3.43 1.520±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AQ CIL_0004AQ_0003 CGP 7:49759106-49858265
CIL_0004AR CIL_0004AR_0003 CGP 7:49778346-49963856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005840 IDA ribosome
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 IMP protein methylation
GO:0008469 IBA histone-arginine N-methyltransferase activity
GO:0016274 IEA protein-arginine N-methyltransferase activity
GO:0018216 IEA peptidyl-arginine methylation
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0034969 IBA histone arginine methylation
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0046872 IEA metal ion binding
GO:0072341 IEA modified amino acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330796 PRMT3-002 nonsense_mediated_decay Homo_sapiens 0 1707
ENST00000331079 PRMT3-001 protein_coding Homo_sapiens 0 1784
ENST00000437750 PRMT3-003 protein_coding Homo_sapiens 0 1528
ENST00000525188 PRMT3-006 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000526583 PRMT3-005 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000529592 PRMT3-004 retained_intron Homo_sapiens 0 1013

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