C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032728 Tarsl2-001 ENSMUSG00000030515 10090 + 7:65644898-65692091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032728 2.810±0.90 15.284±2.34 3.452±0.27 7.612±4.08 4.868±1.15 4.599±0.56 7.318±0.32 7.524±2.09 6.368±3.45 4.030±0.62 22.710±0.45 8.036±4.01 1.086±0.41 3.125±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CQ CIL_0007CQ_0002 CGP 7:65644898-65701913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006435 IEA threonyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335968 TARSL2-001 protein_coding Homo_sapiens 0 2392
ENST00000539112 TARSL2-003 nonsense_mediated_decay Homo_sapiens 0 2263
ENST00000558533 TARSL2-004 nonsense_mediated_decay Homo_sapiens 0 898
ENST00000559492 TARSL2-005 processed_transcript Homo_sapiens 0 261
ENST00000615656 TARSL2-201 protein_coding Homo_sapiens 0 2263

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