C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033123 Abcc8-201 ENSMUSG00000040136 10090 - 7:46104523-46180033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033123 0.147±0.10 0.260±0.03 0.090±0.00 1.262±0.99 0.714±0.51 0.638±0.28 7.586±0.93 0.120±0.05 0.023±0.02 0.264±0.13 0.280±0.07 0.105±0.05 0.603±0.57 0.091±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZU CIL_0003ZU_0002 CGP 7:46098725-46180033
CIL_0003ZZ CIL_0003ZZ_0002 CGP 7:46104523-46238503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IDA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006813 IEA potassium ion transport
GO:0007165 IEA signal transduction
GO:0008076 IEA voltage-gated potassium channel complex
GO:0008281 IEA sulfonylurea receptor activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0044325 IEA ion channel binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302539 ABCC8-201 protein_coding Homo_sapiens 0 5980
ENST00000389817 ABCC8-001 protein_coding Homo_sapiens 0 5967
ENST00000524561 ABCC8-010 retained_intron Homo_sapiens 0 822
ENST00000525022 ABCC8-014 retained_intron Homo_sapiens 0 296
ENST00000526002 ABCC8-004 retained_intron Homo_sapiens 0 592
ENST00000526037 ABCC8-018 retained_intron Homo_sapiens 0 460
ENST00000526168 ABCC8-013 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000527905 ABCC8-002 nonsense_mediated_decay Homo_sapiens 0 2259
ENST00000528374 ABCC8-012 protein_coding Homo_sapiens 0 752
ENST00000531137 ABCC8-011 retained_intron Homo_sapiens 0 353
ENST00000531642 ABCC8-015 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000531891 ABCC8-016 nonsense_mediated_decay Homo_sapiens 0 472
ENST00000531911 ABCC8-006 retained_intron Homo_sapiens 0 686
ENST00000532220 ABCC8-017 retained_intron Homo_sapiens 0 215
ENST00000532728 ABCC8-003 retained_intron Homo_sapiens 0 2255
ENST00000612903 ABCC8-202 protein_coding Homo_sapiens 0 219

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