C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527905 ABCC8-002 ENSG00000006071 9606 - 11:17396811-17476819 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000527905
Transcript ID Brain Colon
ENST00000527905 1.643±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZU CIL_0003ZU_0001 CGP 11:17385859-17476845
CIL_0003ZZ CIL_0003ZZ_0001 CGP 11:17392885-17544416

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0006813 IEA potassium ion transport
GO:0007165 IEA signal transduction
GO:0008281 IEA sulfonylurea receptor activity
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033123 Abcc8-201 protein_coding Mus_musculus 0 2259
ENSDART00000088191 ABCC8 (2 of 3)-201 protein_coding Danio_rerio 0 448

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