C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033139 Ate1-201 ENSMUSG00000030850 10090 - 7:130391526-130519539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033139 3.943±0.96 5.319±1.85 3.994±0.88 7.018±2.98 2.661±0.62 2.371±0.52 2.509±0.59 3.428±0.45 2.053±0.85 4.687±1.17 2.794±1.22 4.299±1.03 6.467±2.62 2.752±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_00095T CIL_00095T_0002 VISTA 7:130125765-130727321
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0001BD CIL_0001BD_0002 CGP 7:130391526-130573118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004057 IDA arginyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016598 IDA protein arginylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000224652 ATE1-201 protein_coding Homo_sapiens 0 1557
ENST00000369040 ATE1-202 protein_coding Homo_sapiens 0 1081
ENST00000369043 ATE1-001 protein_coding Homo_sapiens 0 1319
ENST00000423243 ATE1-002 protein_coding Homo_sapiens 0 1557
ENST00000481784 ATE1-003 processed_transcript Homo_sapiens 0 206
ENST00000485281 ATE1-005 processed_transcript Homo_sapiens 0.000000000000002 86
ENST00000540606 ATE1-203 protein_coding Homo_sapiens 0 1277
ENST00000543447 ATE1-204 protein_coding Homo_sapiens 0 1208

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