C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369043 ATE1-001 ENSG00000107669 9606 - 10:121740424-121928036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369043
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369043 2.249±0.00 1.467±0.00 1.506±0.00 4.075±0.62 1.660±0.16 3.621±0.48 4.461±1.02 1.725±0.25 2.891±1.97 1.479±0.00 4.897±0.00 3.065±1.71 1.115±0.43 1.255±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BE CIL_0001BE_0001 CGP 10:121478334-121928801
CIL_00095T CIL_00095T_0001 VISTA 10:121499915-122101503
CIL_0001BD CIL_0001BD_0001 CGP 10:121740421-121975217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004057 IEA:TAS arginyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016598 IEA:NAS protein arginylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035458 Ate1-202 protein_coding Mus_musculus 0 1530
ENSMUST00000178534 Ate1-204 protein_coding Mus_musculus 0 1487
ENSMUST00000033139 Ate1-201 protein_coding Mus_musculus 0 1319
ENSMUST00000094017 Ate1-203 protein_coding Mus_musculus 0 1277

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