C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000224652 ATE1-201 ENSG00000107669 9606 - 10:121740421-121928063 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLiverLungMuscleOvaryPlacentaTestisENST00000224652
Transcript ID Adipose Adrenal Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000224652 2.228±0.00 0.442±0.00 1.048±0.00 0.747±0.00 1.283±0.00 3.086±0.00 1.280±0.00 1.002±0.00 2.962±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BE CIL_0001BE_0001 CGP 10:121478334-121928801
CIL_00095T CIL_00095T_0001 VISTA 10:121499915-122101503
CIL_0001BD CIL_0001BD_0001 CGP 10:121740421-121975217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004057 IEA:TAS arginyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016598 NAS:IEA protein arginylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033139 Ate1-201 protein_coding Mus_musculus 0 1557
ENSMUST00000094017 Ate1-203 protein_coding Mus_musculus 0 1515
ENSMUST00000035458 Ate1-202 protein_coding Mus_musculus 0 1314
ENSMUST00000178534 Ate1-204 protein_coding Mus_musculus 0 1271

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