C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine rich nucleolar protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033277 Knop1-001 ENSMUSG00000030980 10090 - 7:118845760-118856254 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000033277
Transcript ID Ovary Placenta Testis
ENSMUST00000033277 38.320±0.00 31.939±5.67 150.523±229.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MW CIL_0006MW_0002 CGP 7:118712552-118842966
CIL_00054B CIL_00054B_0002 CGP 7:118740226-118856254
CIL_0006MO CIL_0006MO_0002 CGP 7:118842222-118972652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219837 KNOP1-001 protein_coding Homo_sapiens 0 243
ENST00000358374 KNOP1P5-001 processed_pseudogene Homo_sapiens 2e-30 137
ENST00000445020 KNOP1P4-001 processed_pseudogene Homo_sapiens 2e-22 111
ENST00000567367 KNOP1-003 protein_coding Homo_sapiens 0.00000000000001 84
ENST00000568230 KNOP1-005 protein_coding Homo_sapiens 0 243

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