C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysine-rich nucleolar protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219837 KNOP1-001 ENSG00000103550 9606 - 16:19701934-19718234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryENST00000219837
Transcript ID Colon Liver Ovary
ENST00000219837 0.984±0.00 0.811±0.12 1.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MW CIL_0006MW_0001 CGP 16:19523811-19706793
CIL_00054B CIL_00054B_0001 CGP 16:19555240-19718235
CIL_0006MO CIL_0006MO_0001 CGP 16:19701934-19858467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116280 Knop1-202 protein_coding Mus_musculus 0 243
ENSMUST00000106550 Knop1-201 protein_coding Mus_musculus 0 243
ENSMUST00000033277 Knop1-001 protein_coding Mus_musculus 0 243
ENSMUST00000106549 Knop1-004 protein_coding Mus_musculus 0 243
ENSMUST00000126792 Knop1-005 protein_coding Mus_musculus 0 243
ENSMUST00000063607 Knop1-002 protein_coding Mus_musculus 0 243
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000009 58

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