C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal interaction molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033289 Stim1-201 ENSMUSG00000030987 10090 + 7:102267824-102436848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033289
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033289 16.259±5.41 25.118±3.24 31.959±0.39 8.224±4.03 30.112±7.93 59.135±4.06 4.260±1.78 7.297±1.08 8.962±2.47 22.942±2.74 48.126±5.19 17.128±6.69 20.461±14.90 37.719±9.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G2 CIL_0000G2_0003 CGP 7:102239123-102436848
CIL_0005LF CIL_0005LF_0002 CGP 7:102267824-102469771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002115 IGI store-operated calcium entry
GO:0005246 IEA calcium channel regulator activity
GO:0005509 ISS calcium ion binding
GO:0005513 ISS detection of calcium ion
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005874 IEA microtubule
GO:0005886 IEA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006812 IMP cation transport
GO:0015279 IEA store-operated calcium channel activity
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0030426 IEA growth cone
GO:0032237 ISS activation of store-operated calcium channel activity
GO:0043234 IPI protein complex
GO:0051010 ISS microtubule plus-end binding
GO:0051924 ISS regulation of calcium ion transport
GO:0070588 IEA calcium ion transmembrane transport
GO:2001256 IEA regulation of store-operated calcium entry

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085865 stim1a-201 protein_coding Danio_rerio 0 713
ENSDART00000122134 stim1a-001 protein_coding Danio_rerio 0 713
ENSDART00000142079 stim1b-001 protein_coding Danio_rerio 0 448
ENSDART00000100932 stim1b-201 protein_coding Danio_rerio 0 440
ENSDART00000012089 stim2b-201 protein_coding Danio_rerio 0 248
ENST00000300737 STIM1-001 protein_coding Homo_sapiens 0 3993
ENST00000524822 STIM1-017 protein_coding Homo_sapiens 0 383
ENST00000525055 STIM1-007 protein_coding Homo_sapiens 0 490
ENST00000525403 STIM1-004 protein_coding Homo_sapiens 0 603
ENST00000526156 STIM1-011 retained_intron Homo_sapiens 0 955
ENST00000526596 STIM1-010 protein_coding Homo_sapiens 0 937
ENST00000526771 STIM1-019 processed_transcript Homo_sapiens 0 544
ENST00000527484 STIM1-020 processed_transcript Homo_sapiens 0 198
ENST00000527651 STIM1-002 protein_coding Homo_sapiens 0 2252
ENST00000528656 STIM1-016 protein_coding Homo_sapiens 0 621
ENST00000530554 STIM1-018 protein_coding Homo_sapiens 0 481
ENST00000531332 STIM1-009 retained_intron Homo_sapiens 0 660
ENST00000532610 STIM1-015 protein_coding Homo_sapiens 0 673
ENST00000532919 STIM1-005 protein_coding Homo_sapiens 0 713
ENST00000532990 STIM1-006 protein_coding Homo_sapiens 0 435
ENST00000533343 STIM1-008 retained_intron Homo_sapiens 0 678
ENST00000533445 STIM1-014 processed_transcript Homo_sapiens 0 573
ENST00000533977 STIM1-003 protein_coding Homo_sapiens 0 2542
ENST00000616714 STIM1-201 protein_coding Homo_sapiens 0 2551

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