C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, theta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598523 GABRQ-001 ENSG00000268089 9606 + X:152638183-152657534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000598523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000598523 0.002±0.00 0.069±0.00 0.010±0.00 1.127±0.98 0.011±0.00 0.055±0.05 0.018±0.01 0.031±0.00 0.088±0.00 0.043±0.02 0.032±0.02 0.669±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0001 CGP X:152166234-152657534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005326 TAS neurotransmitter transporter activity
GO:0005887 TAS integral component of plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006836 TAS neurotransmitter transport
GO:0007165 TAS signal transduction
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0043235 IDA receptor complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033711 Gabrq-001 protein_coding Mus_musculus 0 1476
ENSMUST00000114553 Gabrq-002 protein_coding Mus_musculus 0 1319

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