C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033847 Agpat5-002 ENSMUSG00000031467 10090 + 8:18846279-18883421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033847
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033847 8.396±1.76 20.143±7.33 6.452±0.70 9.999±3.02 5.017±1.47 25.669±3.21 6.221±0.68 6.576±1.88 5.251±2.91 7.372±1.95 4.190±0.42 27.750±11.93 13.033±6.41 2.110±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KU CIL_0008KU_0002 VISTA 8:18411246-19012747
CIL_00006Y CIL_00006Y_0003 CGP 8:18690263-18891361
CIL_0005PC CIL_0005PC_0002 CGP 8:18846277-18950975

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003841 IDA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005739 IDA mitochondrion
GO:0006639 IDA acylglycerol metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285518 AGPAT5-001 protein_coding Homo_sapiens 0 1206
ENST00000455855 AGPAT5P1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000523234 AGPAT5-002 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000523586 AGPAT5-004 nonsense_mediated_decay Homo_sapiens 4e-34 148

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