C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-acylglycerol-3-phosphate O-acyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285518 AGPAT5-001 ENSG00000155189 9606 + 8:6708357-6759666 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285518
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285518 2.996±0.00 3.096±0.00 0.564±0.00 7.654±0.00 1.125±0.13 2.974±0.16 0.550±0.45 4.772±2.97 2.025±1.00 1.976±0.00 3.017±0.00 3.409±0.84 3.955±1.06 14.472±3.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KU CIL_0008KU_0001 VISTA 8:6228238-6829442
CIL_00006Y CIL_00006Y_0002 CGP 8:6499651-6759666
CIL_0005PC CIL_0005PC_0001 CGP 8:6708357-6835644

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0003841 NAS 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006639 IEA acylglycerol metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008654 NAS phospholipid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019432 TAS triglyceride biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149565 Agpat5-001 protein_coding Mus_musculus 0 1219
ENSMUST00000033847 Agpat5-002 protein_coding Mus_musculus 0 1206

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