C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034218 Slc12a3-201 ENSMUSG00000031766 10090 + 8:94329192-94366213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034218
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034218 0.045±0.02 0.013±0.00 0.012±0.00 0.037±0.02 0.035±0.01 0.040±0.02 0.029±0.02 201.816±61.77 0.015±0.01 0.050±0.01 0.010±0.00 0.059±0.04 0.043±0.03 0.154±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000450 CIL_000450_0003 CGP 8:94214597-94366213
CIL_000453 CIL_000453_0003 CGP 8:94329192-94395377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IDA transporter activity
GO:0005515 IEA protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006814 IMP sodium ion transport
GO:0015377 IEA cation:chloride symporter activity
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0070062 IEA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042061 slc12a10.2-001 protein_coding Danio_rerio 0.0000000002 73
ENST00000262502 SLC12A3-003 protein_coding Homo_sapiens 0 2632
ENST00000438926 SLC12A3-001 protein_coding Homo_sapiens 0 2651
ENST00000563236 SLC12A3-005 protein_coding Homo_sapiens 0 2651
ENST00000563352 SLC12A3-007 processed_transcript Homo_sapiens 0 200
ENST00000566786 SLC12A3-002 protein_coding Homo_sapiens 0 2632
ENST00000569002 SLC12A3-006 retained_intron Homo_sapiens 0 241

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