C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034698 Tmed1-201 ENSMUSG00000032180 10090 - 9:21507380-21510186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000034698
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000034698 24.847±3.02 36.981±6.07 19.141±1.11 15.706±5.90 17.661±5.86 24.541±3.27 28.297±4.06 16.844±2.24 21.091±3.08 47.099±16.80 28.992±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076W CIL_00076W_0003 CGP 9:21411837-21507759
CIL_000770 CIL_000770_0003 CGP 9:21424908-21510186
CIL_0002SD CIL_0002SD_0002 CGP 9:21507380-21545333

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000214869 TMED1-001 protein_coding Homo_sapiens 0 845
ENST00000588259 TMED1-005 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000588289 TMED1-003 protein_coding Homo_sapiens 0 643
ENST00000591157 TMED1-002 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000591695 TMED1-006 protein_coding Homo_sapiens 0 351

Loading