C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 protein transport domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000214869 TMED1-001 ENSG00000099203 9606 - 19:10832438-10836290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverMuscleOvaryPlacentaTestisENST00000214869
Transcript ID Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000214869 17.711±0.00 13.202±0.00 19.163±0.00 5.319±0.00 31.684±0.90 44.928±11.41 19.827±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076W CIL_00076W_0002 CGP 19:10701430-10833488
CIL_000770 CIL_000770_0002 CGP 19:10718079-10836318
CIL_0002SD CIL_0002SD_0001 CGP 19:10832438-10869790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034698 Tmed1-201 protein_coding Mus_musculus 0 845

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